Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12111817_12113797_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12111817 - 12113797

Intron Length:

1981

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTTTC

5'SS Class:

major

3'SS Sequence:

ATGACTCTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

GTTACAATGACT

Flanking Amino Acid:

TQWINQTWGPCTVSCGGGIQ

Intron Amino Acid Position:

1530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

73.5

38.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

74.6

0.55

0.9

70.3

40.5

Minor 5ss

43.8

-0.7

3.1

61.4

43.6

Minor BPS

50.5

0.09

75.74

40.1

Associated Gene:

Gene:

ADAMTS12

Ensembl Gene ID:

ENSAPLG00000002467

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027015

11945758 - 12116274

170517

ENSAPLT00000002531

11945758 - 12116274

170517