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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1211897_1219629_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1211897 - 1219629

Intron Length:

7733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CGGTGCTGACAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

66.3

0.4

1.1

41.8

Major PPT

0.76

0.7

31.7

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

39.8

-0.7

2.1

44.86

43.1

Associated Gene:

Gene:

ARID3C

Ensembl Gene ID:

ENSAPLG00000007857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008146

1211779 - 1224202

12424