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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12143848_12143929_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12143848 - 12143929

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

ACTTTATTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTTTCCATCACT

Flanking Amino Acid:

LPVRFNLTFVSHDGNDKTRP

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

35.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

78.9

0.65

0.9

72.8

35.9

Minor 5ss

36.6

-1.5

3.3

47.9

47.8

Minor BPS

62.7

0.48

2.1

84.77

41.8

Associated Gene:

Gene:

TARS1

Ensembl Gene ID:

ENSAPLG00000016069

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016816

12140530 - 12154296

13767