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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1214959_1219537_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1214959 - 1219537

Intron Length:

4579

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGT|GCATGGAGA

5'SS Class:

weak_major

3'SS Sequence:

GGGGTGATGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGTTAAA

U12 Branch Point Sequence:

GGGGGGTTAAAG

Flanking Amino Acid:

AQAGVGAGDECAGASRVHIP

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.11

1.4

55.1

Major BPS

57.4

0.19

1.3

61.7

43.1

Major PPT

49.9

-0

1.2

39.6

47.8

Minor 5ss

29.4

-2.4

4.1

39.3

46.3

Minor BPS

37.4

-1

2.4

37.65

44.5

Associated Gene:

Gene:

ARID3C

Ensembl Gene ID:

ENSAPLG00000007857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028066

1214562 - 1223646

9085