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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12152856_12153726_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12152856 - 12153726

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGGCCT

5'SS Class:

major

3'SS Sequence:

CTTAGGATGGGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CTTTTTGGAACT

Flanking Amino Acid:

SPSLTLSILSCFGAFLMTVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.1

57.1

41.7

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

45.5

-0.2

1.8

46.8

44.7

Minor 5ss

30.1

-2.3

3.4

45.5

43.2

Minor BPS

50.3

0.09

2.1

75.64

41.7

Associated Gene:

Gene:

TARS1

Ensembl Gene ID:

ENSAPLG00000016069

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016816

12140530 - 12154296

13767