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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12185562_12203436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12185562 - 12203436

Intron Length:

17875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCTTCTTTTATT

Flanking Amino Acid:

QKQGLHEDDYVNMFVEGFHD

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

93.8

0.99

0.6

92.5

25.7

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

69.5

0.7

1.6

83.31

38.3

Associated Gene:

Gene:

NPR3

Ensembl Gene ID:

ENSAPLG00000023703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042174

12173681 - 12216741

43061