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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1219703_1221799_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1219703 - 1221799

Intron Length:

2097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGGTG

5'SS Class:

strong_major

3'SS Sequence:

GCTCATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTAAAT

U12 Branch Point Sequence:

AACTCAGTAAAG

Flanking Amino Acid:

TTSSASCRREAYAKKPSQYR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

70.2

40.4

Major BPS

64.6

0.36

1.3

73.3

39.1

Major PPT

0.67

0.9

76.4

37.3

Minor 5ss

32.2

-2

3.7

45.9

49.3

Minor BPS

43.4

-0.6

2.3

49.59

43.6

Associated Gene:

Gene:

ARID3C

Ensembl Gene ID:

ENSAPLG00000007857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008146

1211779 - 1224202

12424