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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1222808_1223052_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1222808 - 1223052

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CCCGTGGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAGGAT

U12 Branch Point Sequence:

TCTGGCTGAGCT

Flanking Amino Acid:

QMGQAHGVKKEDGAVPAVPG

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

38.7

Major BPS

47.8

-0.1

1.5

45.5

47.5

Major PPT

67.6

0.4

59.9

40.5

Minor 5ss

25.2

-2.9

3.2

43.6

Minor BPS

46.5

-0.1

2.2

68.42

48.1

Associated Gene:

Gene:

ARID3C

Ensembl Gene ID:

ENSAPLG00000007857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008146

1211779 - 1224202

12424

ENSAPLT00000028066

1214562 - 1223646

9085