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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1223214_1223385_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1223214 - 1223385

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGCCCTG

5'SS Class:

major

3'SS Sequence:

GCTGCCCGGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTTAG

U12 Branch Point Sequence:

CCACCCTTAGGG

Flanking Amino Acid:

LETGEPPEKKDGAPWLPPAG

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.2

0.24

1.2

50.6

47.7

Major BPS

-0.1

1.5

42.9

40.1

Major PPT

43.6

-0.3

1.7

42.5

38.6

Minor 5ss

40.2

-1.1

3.4

55.3

48.9

Minor BPS

45.5

-0.4

1.9

45.34

46.7

Associated Gene:

Gene:

ARID3C

Ensembl Gene ID:

ENSAPLG00000007857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028066

1214562 - 1223646

9085