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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1223552_1224059_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1223552 - 1224059

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

CGGTCCCTAACC

Flanking Amino Acid:

SIEINGVVYTGVLFARRPAA

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.4

34.2

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

77.4

0.62

0.7

69.1

31.4

Minor 5ss

34.4

-1.8

2.8

42.8

Minor BPS

61.6

0.34

1.8

67.9

43.4

Associated Gene:

Gene:

ARID3C

Ensembl Gene ID:

ENSAPLG00000007857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008146

1211779 - 1224202

12424