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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1223552_1225572_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1223552 - 1225572

Intron Length:

2021

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAGA

5'SS Class:

strong_major

3'SS Sequence:

CCTGAGTAACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

GTCACCTGAGTA

Flanking Amino Acid:

SIEINGVVYTARIDARSPRP

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.4

34.2

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

56.3

0.14

1.1

47.4

43.8

Minor 5ss

34.4

-1.8

2.8

42.8

Minor BPS

48.4

-0.1

1.7

57.99

41.5

Associated Gene:

Gene:

ARID3C

Ensembl Gene ID:

ENSAPLG00000007857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026768

1219192 - 1225850

6659