Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12283051_12283618_R

Intron Information:

Intron Rank:

141841

Intron Class:

major

Intron Phase:

Intron Coordinates:

12283051 - 12283618

Intron Length:

568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTGCCTTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

GTGTTTCTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

77.9

0.69

78.3

31.3

Major PPT

0.63

0.9

41.8

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

46.6

-0.1

1.9

64.17

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023633

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033919

12282786 - 12283881

1096