Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1229068_1229235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1229068 - 1229235

Intron Length:

168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGCCTG

5'SS Class:

major

3'SS Sequence:

TCTGTGCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

ACAAACAAAATG

Flanking Amino Acid:

QPILDSPSIQAVPDHAAKLQ

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

63.8

47.8

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

78.8

0.65

0.9

69.2

41.8

Minor 5ss

40.4

-1.1

3.3

55.9

48.3

Minor BPS

38.3

-1

1.9

37.35

38.6

Associated Gene:

Gene:

DCTN3

Ensembl Gene ID:

ENSAPLG00000005990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006204

1226993 - 1230585

3593