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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1237565_1239386_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1237565 - 1239386

Intron Length:

1822

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCATTGTGG

5'SS Class:

weak_major

3'SS Sequence:

CCAGACTGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCCCAT

U12 Branch Point Sequence:

CTCCCCCAGACT

Flanking Amino Acid:

HPRVLKELVDGAEKGLEGSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.3

42.4

44.6

Major BPS

49.3

-0

1.3

58.2

40.4

Major PPT

-0.2

1.2

40.5

37.9

Minor 5ss

32.1

-2

4.1

43.7

Minor BPS

46.4

-0.2

65.33

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046291

1232019 - 1239435

7417