Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12419870_12419952_R

Intron Information:

Intron Rank:

137032

Intron Class:

major

Intron Phase:

Intron Coordinates:

12419870 - 12419952

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGTGTCCT

5'SS Class:

major

3'SS Sequence:

TCTGTTTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

CCTTGTGTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

66.1

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

75.9

0.58

0.9

71.5

38.4

Minor 5ss

39.9

-1.1

2.9

55.3

Minor BPS

45.5

-0.3

2.3

57.68

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021223

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036423

12419245 - 12429251

10007

ENSAPLT00000017462

12414471 - 12429097

14627