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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12460_12563_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12460 - 12563

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

CTCTTTGTCACG

Flanking Amino Acid:

RPIPWVPGAASEHQLLVAMT

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

75.6

0.58

0.8

68.4

31.9

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

42.4

-0.7

2.3

49.22

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005719

2781 - 13437

10657