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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12472598_12477948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12472598 - 12477948

Intron Length:

5351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGTGTTTTGACA

Flanking Amino Acid:

SSNRDENMFQIGKMRYVSVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

72.8

39.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

75.9

0.58

72.2

42.7

Minor 5ss

39.7

-1.2

3.4

49.2

Minor BPS

62.5

0.39

1.4

69.98

36.5

Associated Gene:

Gene:

SUB1

Ensembl Gene ID:

ENSAPLG00000023079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033369

12469665 - 12480646

10982