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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12478069_12479655_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12478069 - 12479655

Intron Length:

1587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAAATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTCTATTTTATT

Flanking Amino Acid:

SDSDSEVDKKAKRKKQAAPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

28.5

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

69.1

0.43

67.4

38.2

Minor 5ss

33.3

-1.9

3.2

48.5

47.2

Minor BPS

56.1

0.27

1.8

76.36

40.6

Associated Gene:

Gene:

SUB1

Ensembl Gene ID:

ENSAPLG00000023079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033369

12469665 - 12480646

10982