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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12508844_12511329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12508844 - 12511329

Intron Length:

2486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

PPPVTTQNYQDSYSYVRSTA

Intron Amino Acid Position:

324

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

26.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.77

0.8

82.3

Minor 5ss

45.6

-0.5

2.5

57.6

47.1

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

ZFR

Ensembl Gene ID:

ENSAPLG00000015627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016314

12505898 - 12534308

28411

ENSAPLT00000016178

12491544 - 12539316

47773

ENSAPLT00000045485

12491266 - 12540367

49102

ENSAPLT00000043847

12491544 - 12540367

48824