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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12534400_12538241_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12534400 - 12538241

Intron Length:

3842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTATTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCTTCATTAGCC

Flanking Amino Acid:

VPTWSDFPSWAMELLVEKAI

Intron Amino Acid Position:

1063

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

83.1

30.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

81.8

0.72

0.9

75.7

38.1

Minor 5ss

31.5

-2.1

2.7

41.5

Minor BPS

63.3

0.4

1.9

75.69

40.6

Associated Gene:

Gene:

ZFR

Ensembl Gene ID:

ENSAPLG00000015627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045485

12491266 - 12540367

49102

ENSAPLT00000043847

12491544 - 12540367

48824

ENSAPLT00000016178

12491544 - 12539316

47773