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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12538354_12538458_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12538354 - 12538458

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

CTAACCATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

GTGCTACTAACA

Flanking Amino Acid:

ECISSGIILKGGPGLLDPCE

Intron Amino Acid Position:

1100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.8

76.1

39.3

Major BPS

76.8

0.67

0.9

75.9

Major PPT

0.36

0.9

58.6

36.7

Minor 5ss

29.2

-2.4

3.8

40.8

45.4

Minor BPS

46.9

-0.2

1.9

59.55

39.6

Associated Gene:

Gene:

ZFR

Ensembl Gene ID:

ENSAPLG00000015627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045485

12491266 - 12540367

49102

ENSAPLT00000043847

12491544 - 12540367

48824

ENSAPLT00000016178

12491544 - 12539316

47773