Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12580987_12581898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12580987 - 12581898

Intron Length:

912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTGGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TAATTGTGACCT

Flanking Amino Acid:

NSQHQKDTNTTGESLETQSG

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

77.3

37.9

Major BPS

81.9

0.79

0.9

80.1

Major PPT

82.6

0.73

80.6

Minor 5ss

35.6

-1.6

3.8

56.2

Minor BPS

44.8

-0.3

2.3

66.44

43.9

Associated Gene:

Gene:

MTMR12

Ensembl Gene ID:

ENSAPLG00000013094

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045342

12560035 - 12583652

23618

ENSAPLT00000024728

12559971 - 12583652

23682