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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12699166_12699244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12699166 - 12699244

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAGA

5'SS Class:

major

3'SS Sequence:

CCTCTCCATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

AGATCATTCATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

70.8

41.1

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

70.3

0.46

0.8

62.4

33.6

Minor 5ss

38.8

-1.3

2.8

49.6

46.2

Minor BPS

49.6

0.05

69.49

41.2

Associated Gene:

Gene:

PDZD2

Ensembl Gene ID:

ENSAPLG00000012765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043159

12698817 - 12856516

157700