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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12707249_12722545_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12707249 - 12722545

Intron Length:

15297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

GCACTCCTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.2

39.5

Major BPS

0.55

71.8

31.4

Major PPT

86.8

0.83

0.7

81.2

23.8

Minor 5ss

30.2

-2.3

2.6

28.5

Minor BPS

49.9

-0

1.7

58.11

40.1

Associated Gene:

Gene:

PDZD2

Ensembl Gene ID:

ENSAPLG00000012765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047448

12706722 - 12856516

149795

ENSAPLT00000018360

12706722 - 12856516

149795