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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12744696_12785600_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12744696 - 12785600

Intron Length:

40905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCGGGGAG

5'SS Class:

major

3'SS Sequence:

CTTATTAAAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TGCTTATTAAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.4

54.9

44.4

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

67.8

0.4

64.1

40.5

Minor 5ss

22.6

-3.2

3.4

28.2

Minor BPS

51.9

-0

1.8

58.28

Associated Gene:

Gene:

PDZD2

Ensembl Gene ID:

ENSAPLG00000012765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036750

12744380 - 12856516

112137