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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12792316_12820299_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12792316 - 12820299

Intron Length:

27984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

VPDIGDQPAQVMETEKSQDP

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

78.8

38.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.77

0.8

82.3

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

PDZD2

Ensembl Gene ID:

ENSAPLG00000012765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034791

12722546 - 12858448

135903