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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_12837508_12837621_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12837508 - 12837621

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTCAC

5'SS Class:

major

3'SS Sequence:

TTCCCCATCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAC

U12 Branch Point Sequence:

TCTTCCCCATCA

Flanking Amino Acid:

SVEIDDESQDTFDYSSVPEV

Intron Amino Acid Position:

1016

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

62.5

38.1

Major BPS

69.9

0.49

0.9

61.1

36.4

Major PPT

70.9

0.47

0.8

65.5

28.8

Minor 5ss

31.3

-2.1

2.9

41.2

39.1

Minor BPS

-0

2.1

68.46

43.7

Associated Gene:

Gene:

PDZD2

Ensembl Gene ID:

ENSAPLG00000012765

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047448

12706722 - 12856516

149795