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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13000009_13005502_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13000009 - 13005502

Intron Length:

5494

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTTCTCCTAATC

Flanking Amino Acid:

KFVLGQCIPEDYDVCAEAPC

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

81.9

0.79

0.9

80.1

Major PPT

82.3

0.73

0.8

73.7

36.9

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

63.8

0.41

1.6

76.28

33.5

Associated Gene:

Gene:

CCBE1

Ensembl Gene ID:

ENSAPLG00000012572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013098

12928073 - 13020979

92907