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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13006515_13011462_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13006515 - 13011462

Intron Length:

4948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATGCC

5'SS Class:

major

3'SS Sequence:

TGCTTTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

GGATCTTTATAT

Flanking Amino Acid:

DGRTCTKGDKAGLPEKSESV

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

68.3

Major BPS

79.2

0.73

75.3

39.4

Major PPT

86.6

0.82

0.7

84.6

30.4

Minor 5ss

39.4

-1.2

3.1

53.2

44.1

Minor BPS

53.3

0.18

1.7

67.94

42.3

Associated Gene:

Gene:

CCBE1

Ensembl Gene ID:

ENSAPLG00000012572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013098

12928073 - 13020979

92907