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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13018981_13019072_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13018981 - 13019072

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTCAGTATT

5'SS Class:

major

3'SS Sequence:

TTTTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TCCTTGTGAACA

Flanking Amino Acid:

HIKQGRRGPVGPPGAPGRDG

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.3

83.5

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

0.88

0.8

84.5

30.4

Minor 5ss

37.2

-1.4

2.9

49.2

40.8

Minor BPS

48.9

-0

2.2

63.1

43.6

Associated Gene:

Gene:

CCBE1

Ensembl Gene ID:

ENSAPLG00000012572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013098

12928073 - 13020979

92907