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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13019666_13020745_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13019666 - 13020745

Intron Length:

1080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

CTTGTGGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

ATGACCGTACCT

Flanking Amino Acid:

RGAPGPKGIPGPPGSFDFLL

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

0.6

1.2

75.9

36.3

Major PPT

72.5

0.51

65.3

41.1

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

48.1

-0

2.3

70.84

45.9

Associated Gene:

Gene:

CCBE1

Ensembl Gene ID:

ENSAPLG00000012572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013098

12928073 - 13020979

92907