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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13024054_13028063_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13024054 - 13028063

Intron Length:

4010

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCCTT

5'SS Class:

strong_major

3'SS Sequence:

GTACCTGGCACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

TAATCCTGTATG

Flanking Amino Acid:

DWYQSLKAAVSAEKNIFQAL

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.7

44.5

Major BPS

0.47

1.2

69.9

35.3

Major PPT

59.3

0.21

1.1

52.7

41.4

Minor 5ss

42.4

-0.8

3.5

64.4

Minor BPS

-0.1

1.9

58.53

Associated Gene:

Gene:

ARHGEF39

Ensembl Gene ID:

ENSAPLG00000006241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041019

13024023 - 13039706

15684

ENSAPLT00000026495

13024023 - 13036865

12843