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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13027866_13028063_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13027866 - 13028063

Intron Length:

198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTTTTCTCAACA

Flanking Amino Acid:

DWYQSLKAAVRRLKA*

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.7

44.5

Major BPS

81.9

0.79

0.8

81.9

Major PPT

84.9

0.79

0.8

81.9

28.6

Minor 5ss

42.4

-0.8

3.5

64.4

Minor BPS

78.1

0.88

1.4

87.43

30.3

Associated Gene:

Gene:

ARHGEF39

Ensembl Gene ID:

ENSAPLG00000006241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044273

13026197 - 13039366

13170

ENSAPLT00000006475

13027850 - 13037037

9188