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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13028153_13028956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13028153 - 13028956

Intron Length:

804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

GTTTGTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTACAT

U12 Branch Point Sequence:

CATCCAGGAACA

Flanking Amino Acid:

HTQSQGGLLSLSFPHKTLLL

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

83.8

34.5

Major BPS

58.8

0.22

1.2

66.8

39.9

Major PPT

84.5

0.78

0.8

81.2

36.5

Minor 5ss

43.7

-0.7

2.9

61.3

Minor BPS

42.9

-0.5

2.2

56.47

Associated Gene:

Gene:

ARHGEF39

Ensembl Gene ID:

ENSAPLG00000006241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040228

13028060 - 13040907

12848

ENSAPLT00000026495

13024023 - 13036865

12843

ENSAPLT00000044273

13026197 - 13039366

13170

ENSAPLT00000006475

13027850 - 13037037

9188

ENSAPLT00000041019

13024023 - 13039706

15684

ENSAPLT00000040594

13028060 - 13037065

9006