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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13029187_13032519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13029187 - 13032519

Intron Length:

3333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCATGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CTGTCTTTATTT

Flanking Amino Acid:

KGRKTQLLTAGRWYIREGWL

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

77.8

38.7

Major BPS

83.9

0.84

73.9

41.3

Major PPT

67.1

0.39

0.9

65.8

34.9

Minor 5ss

33.3

-1.9

3.4

47.2

Minor BPS

62.5

0.47

1.6

74.92

Associated Gene:

Gene:

ARHGEF39

Ensembl Gene ID:

ENSAPLG00000006241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040228

13028060 - 13040907

12848

ENSAPLT00000026495

13024023 - 13036865

12843

ENSAPLT00000044273

13026197 - 13039366

13170

ENSAPLT00000006475

13027850 - 13037037

9188

ENSAPLT00000041019

13024023 - 13039706

15684

ENSAPLT00000040594

13028060 - 13037065

9006