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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13032591_13034723_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13032591 - 13034723

Intron Length:

2133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGCAAG

5'SS Class:

major

3'SS Sequence:

TTGTTCGTAAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

TTGTTCGTAAGA

Flanking Amino Acid:

LLPLPLQRLQQENSLQLLRV

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

62.9

43.3

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

51.9

0.04

1.8

62.1

43.3

Minor 5ss

40.9

-1

2.9

54.3

43.7

Minor BPS

51.7

0.05

2.3

70.13

42.8

Associated Gene:

Gene:

ARHGEF39

Ensembl Gene ID:

ENSAPLG00000006241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040594

13028060 - 13037065

9006

ENSAPLT00000040228

13028060 - 13040907

12848

ENSAPLT00000026495

13024023 - 13036865

12843

ENSAPLT00000041019

13024023 - 13039706

15684