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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13032649_13033046_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13032649 - 13033046

Intron Length:

398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGATTT

5'SS Class:

weak_major

3'SS Sequence:

GCTGTTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTGTGATAACC

Flanking Amino Acid:

PDSAEYQKLTKTVKSASEVS

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

32.2

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

76.3

0.59

72.6

42.4

Minor 5ss

55.9

0.2

2.7

73.7

36.6

Minor BPS

48.5

-0.1

2.3

70.45

41.2

Associated Gene:

Gene:

ARHGEF39

Ensembl Gene ID:

ENSAPLG00000006241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044273

13026197 - 13039366

13170

ENSAPLT00000006475

13027850 - 13037037

9188