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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13033118_13034723_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13033118 - 13034723

Intron Length:

1606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGCAAG

5'SS Class:

major

3'SS Sequence:

CTTTCTCTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TCTTTGTGAAAT

Flanking Amino Acid:

LLPLPLQRLQQYKHFLRDLL

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

62.9

43.3

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

81.8

0.72

0.7

24.1

Minor 5ss

40.9

-1

2.9

54.3

43.7

Minor BPS

2.2

73.47

43.3

Associated Gene:

Gene:

ARHGEF39

Ensembl Gene ID:

ENSAPLG00000006241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044273

13026197 - 13039366

13170

ENSAPLT00000006475

13027850 - 13037037

9188