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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13034843_13035479_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13034843 - 13035479

Intron Length:

637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

GTACTCTCAAAG

Flanking Amino Acid:

NLEQANKTLKEQLRKNKSFR

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

87.7

26.2

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

63.9

0.31

57.2

37.8

Minor 5ss

39.6

-1.2

2.9

43.3

Minor BPS

-0.2

1.7

52.38

41.4

Associated Gene:

Gene:

ARHGEF39

Ensembl Gene ID:

ENSAPLG00000006241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040594

13028060 - 13037065

9006

ENSAPLT00000040228

13028060 - 13040907

12848

ENSAPLT00000026495

13024023 - 13036865

12843

ENSAPLT00000044273

13026197 - 13039366

13170

ENSAPLT00000006475

13027850 - 13037037

9188

ENSAPLT00000041019

13024023 - 13039706

15684