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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13035601_13036008_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13035601 - 13036008

Intron Length:

408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGAG

5'SS Class:

major

3'SS Sequence:

TCCTTGTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATCTAT

U12 Branch Point Sequence:

GCCTATCTATCT

Flanking Amino Acid:

GPLESIYSASQVLSLHLERG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

66.4

39.5

Major BPS

0.4

1.3

64.8

42.4

Major PPT

72.1

0.5

67.8

37.6

Minor 5ss

34.2

-1.8

3.2

45.7

43.5

Minor BPS

43.3

-0.4

57.91

44.9

Associated Gene:

Gene:

ARHGEF39

Ensembl Gene ID:

ENSAPLG00000006241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026495

13024023 - 13036865

12843

ENSAPLT00000044273

13026197 - 13039366

13170

ENSAPLT00000006475

13027850 - 13037037

9188

ENSAPLT00000041019

13024023 - 13039706

15684

ENSAPLT00000040594

13028060 - 13037065

9006

ENSAPLT00000040228

13028060 - 13040907

12848