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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13036815_13040865_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13036815 - 13040865

Intron Length:

4051

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCA|GCAAAAAAC

5'SS Class:

weak_major

3'SS Sequence:

CGTTGTGGAAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TGCTACTTATGG

Flanking Amino Acid:

TDAVCCPPVSQRARWERKRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.4

0.06

1.4

58.3

43.3

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

44.9

-0.2

1.7

45.9

44.8

Minor 5ss

-2.9

3.9

39.9

Minor BPS

46.1

-0.4

2.1

52.82

47.4

Associated Gene:

Gene:

ARHGEF39

Ensembl Gene ID:

ENSAPLG00000006241

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040228

13028060 - 13040907

12848