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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13043188_13044875_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13043188 - 13044875

Intron Length:

1688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCAT

5'SS Class:

strong_major

3'SS Sequence:

ATACCTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

ATCTGTATACCT

Flanking Amino Acid:

NSQLEQQILQVNPLLEAFGN

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.9

38.6

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

76.5

0.6

0.9

69.3

36.1

Minor 5ss

34.5

-1.8

3.3

47.2

Minor BPS

-0.3

2.2

66.51

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042842

13039607 - 13066041

26435