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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13046043_13046232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13046043 - 13046232

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTCAGTCACC

Flanking Amino Acid:

ALDMVGFQEQEQVDMQAILA

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

1.2

78.8

38.3

Major BPS

0.65

1.5

85.7

34.9

Major PPT

75.6

0.58

73.5

41.9

Minor 5ss

39.2

-1.2

2.8

49.7

46.6

Minor BPS

48.8

-0.1

2.6

75.46

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042842

13039607 - 13066041

26435