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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13046362_13047595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13046362 - 13047595

Intron Length:

1234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

GACTCCTCATCT

Flanking Amino Acid:

ASRGWLKAAAGQFGVQEDEL

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

0.77

0.7

76.7

31.9

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

54.3

0.21

1.9

70.51

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042842

13039607 - 13066041

26435