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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13049059_13049451_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13049059 - 13049451

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

GTGTGCTCATTT

Flanking Amino Acid:

VDPEVELREIGILDIFGFEN

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

79.7

0.74

79.6

35.6

Major PPT

78.5

0.64

0.7

76.6

25.4

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

45.7

-0.2

2.1

64.67

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042842

13039607 - 13066041

26435