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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13051804_13054297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13051804 - 13054297

Intron Length:

2494

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

ACAAAATTAACT

Flanking Amino Acid:

ITPLLSMLFTATISRTGTLM

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.7

86.2

27.2

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

85.1

0.79

0.8

76.9

37.3

Minor 5ss

25.2

-2.9

3.7

36.3

40.6

Minor BPS

49.8

0.06

1.8

66.83

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042842

13039607 - 13066041

26435