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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13055097_13056001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13055097 - 13056001

Intron Length:

905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

GGTGCTGCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TTTCTCTGATCC

Flanking Amino Acid:

VVDNQMLLQQLRYNGLLETI

Intron Amino Acid Position:

653

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

0.72

38.9

Major PPT

67.3

0.39

62.1

44.4

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

57.3

0.21

1.7

72.59

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042842

13039607 - 13066041

26435