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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13056381_13057779_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13056381 - 13057779

Intron Length:

1399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAACC

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

ACTTATTTCACT

Flanking Amino Acid:

VKPDVSLNKESCLKILQSTD

Intron Amino Acid Position:

697

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.5

37.3

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

0.74

0.8

80.2

31.8

Minor 5ss

33.3

-1.9

3.1

43.9

43.5

Minor BPS

55.3

0.25

1.9

74.83

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042842

13039607 - 13066041

26435