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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13059455_13060001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13059455 - 13060001

Intron Length:

547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATCTACT

Flanking Amino Acid:

RQQAMEAEAQKRISLPIPVP

Intron Amino Acid Position:

788

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

33.2

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

85.3

0.79

0.7

79.9

25.5

Minor 5ss

29.8

-2.3

2.8

32.3

35.9

Minor BPS

53.5

0.19

2.1

80.5

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042842

13039607 - 13066041

26435