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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_13060643_13062669_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13060643 - 13062669

Intron Length:

2027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTACTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TATTTCCTACTT

Flanking Amino Acid:

PSWLHGMISRREAENLLIDK

Intron Amino Acid Position:

896

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

68.1

0.45

58.1

38.5

Major PPT

82.9

0.74

0.8

76.6

30.9

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

54.7

0.23

1.9

77.29

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022133

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042842

13039607 - 13066041

26435